Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 293837 - 293912 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 293962 - 294037 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 294236 - 294311 | Not Available |
| 30s ribosomal protein s6 | CWC22_RS01255 | Not Available | Positive | 294534 - 294875 | 12935.5 |
| primosomal replication protein n | CWC22_RS01260 | Not Available | Positive | 294906 - 295235 | 12346.8 |
| 30s ribosomal protein s18 | CWC22_RS01265 | Not Available | Positive | 295248 - 295475 | 8815.8 |
| 50s ribosomal protein l9 | CWC22_RS01270 | Not Available | Positive | 295511 - 295963 | 15862.1 |
| type iv pilin protein | CWC22_RS01275 | Not Available | Positive | 296375 - 296794 | 15431.4 |
| tfp pilus assembly protein fimt/fimu | CWC22_RS01280 | Not Available | Positive | 296781 - 297242 | 16850.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CWC22_RS01285 | Not Available | Positive | 297233 - 297628 | 14394.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
