Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | CWC22_RS14280 | Not Available | Positive | 3291686 - 3292792 | 40305.0 |
| septal ring lytic transglycosylase rlpa family protein | CWC22_RS14285 | Not Available | Positive | 3292789 - 3293553 | 28460.8 |
| serine hydrolase | CWC22_RS14290 | Not Available | Positive | 3293607 - 3294770 | 42506.8 |
| duf493 family protein ybed | CWC22_RS14295 | Not Available | Positive | 3294911 - 3295189 | 10260.4 |
| lipoyl(octanoyl) transferase lipb | CWC22_RS14300 | Not Available | Positive | 3295204 - 3295857 | 24300.3 |
| lipoyl synthase | CWC22_RS14305 | Not Available | Positive | 3295854 - 3296819 | 36366.2 |
| cytochrome p450 | CWC22_RS14310 | Not Available | Positive | 3298204 - 3299406 | 45218.6 |
| cytochrome p450 | CWC22_RS14315 | Not Available | Positive | 3299403 - 3300533 | 42995.9 |
| loda/goxa family ctq-dependent oxidase | CWC22_RS14320 | Not Available | Positive | 3300806 - 3303925 | 115273.0 |
| tryptophan 7-halogenase | CWC22_RS14325 | Not Available | Positive | 3303937 - 3305088 | 42272.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
