Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf368 domain-containing protein | CWC22_RS14130 | Not Available | Negative | 3255074 - 3256027 | 34157.6 |
| duf3530 family protein | CWC22_RS14135 | Not Available | Positive | 3256150 - 3257010 | 32249.5 |
| co-chaperone djla | CWC22_RS14140 | Not Available | Negative | 3257029 - 3257907 | 33262.5 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | CWC22_RS14145 | Not Available | Negative | 3257897 - 3258574 | 24554.4 |
| aminoglycoside phosphotransferase family protein | CWC22_RS14150 | Not Available | Negative | 3258571 - 3259602 | 39138.0 |
| lps assembly protein lptd | CWC22_RS14155 | Not Available | Positive | 3259700 - 3261982 | 86362.5 |
| peptidylprolyl isomerase sura | CWC22_RS14160 | Not Available | Positive | 3261997 - 3263283 | 48382.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CWC22_RS14165 | Not Available | Positive | 3263297 - 3264289 | 35525.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | CWC22_RS14170 | Not Available | Positive | 3264286 - 3265092 | 30148.6 |
| co2+/mg2+ efflux protein apag | CWC22_RS14175 | Not Available | Positive | 3265076 - 3265465 | 14507.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
