Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent l-amino acid oxidase | CWC22_RS13930 | Not Available | Positive | 3196883 - 3198844 | 73921.7 |
| alpha-keto acid decarboxylase family protein | CWC22_RS13935 | Not Available | Positive | 3198927 - 3200717 | 64706.3 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | CWC22_RS13940 | Not Available | Positive | 3200931 - 3203621 | 101120.0 |
| hpt domain-containing protein | CWC22_RS13945 | Not Available | Positive | 3203611 - 3203955 | 12764.2 |
| response regulator | CWC22_RS13950 | Not Available | Negative | 3204158 - 3205477 | 49826.6 |
| mate family efflux transporter | CWC22_RS13955 | Not Available | Negative | 3205596 - 3206969 | 49739.8 |
| hypothetical protein | CWC22_RS13960 | Not Available | Positive | 3207150 - 3207872 | 26845.8 |
| proteasome subunit alpha | CWC22_RS13965 | Not Available | Negative | 3207820 - 3208326 | 18938.1 |
| transcriptional regulator | CWC22_RS13970 | Not Available | Negative | 3208636 - 3209103 | 17287.0 |
| dmt family transporter | CWC22_RS13975 | Not Available | Negative | 3209241 - 3210146 | 32483.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
