Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal replication protein | CWC22_RS13880 | Not Available | Positive | 3185614 - 3186213 | 23513.2 |
| histone deacetylase | CWC22_RS13885 | Not Available | Positive | 3186230 - 3187156 | 34029.8 |
| late competence development comfb family protein | CWC22_RS13890 | Not Available | Positive | 3187261 - 3187533 | 10789.8 |
| ybam family protein | CWC22_RS13895 | Not Available | Positive | 3187530 - 3187694 | 5998.26 |
| npp1 family protein | CWC22_RS13900 | Not Available | Positive | 3187779 - 3188573 | 28980.6 |
| hypothetical protein | CWC22_RS13905 | Not Available | Negative | 3188612 - 3189070 | 17278.0 |
| efflux rnd transporter permease subunit | CWC22_RS13910 | Not Available | Positive | 3189502 - 3192624 | 112594.0 |
| efflux rnd transporter periplasmic adaptor subunit | CWC22_RS13915 | Not Available | Positive | 3192634 - 3193722 | 39288.1 |
| glycoside hydrolase family 16 protein | CWC22_RS13920 | Not Available | Positive | 3193910 - 3194827 | 35057.8 |
| winged helix-turn-helix domain-containing protein | CWC22_RS13925 | Not Available | Negative | 3194846 - 3196477 | 61009.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
