Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | CWC22_RS13830 | Not Available | Positive | 3164465 - 3166300 | 68713.0 |
| m90 family metallopeptidase | CWC22_RS13835 | Not Available | Negative | 3166386 - 3167213 | 32364.9 |
| helicase-related protein | CWC22_RS13840 | Not Available | Positive | 3167328 - 3169658 | 86271.3 |
| hypothetical protein | CWC22_RS13845 | Not Available | Negative | 3169802 - 3170050 | 8904.54 |
| tonb-dependent receptor domain-containing protein | CWC22_RS13850 | Not Available | Negative | 3170547 - 3173417 | 104736.0 |
| tonb-dependent receptor | CWC22_RS13855 | Not Available | Negative | 3173900 - 3176713 | 102387.0 |
| tonb-dependent receptor plug domain-containing protein | CWC22_RS13860 | Not Available | Negative | 3177205 - 3179838 | 95005.0 |
| dna polymerase ii | CWC22_RS13865 | Not Available | Negative | 3180355 - 3182697 | 87840.6 |
| atp-dependent dna helicase ding | CWC22_RS13870 | Not Available | Positive | 3182765 - 3184834 | 77236.6 |
| tsup family transporter | CWC22_RS13875 | Not Available | Positive | 3184838 - 3185617 | 27502.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
