Pseudoalteromonas rubra strain S4059

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas rubra strain S4059 is a marine bacterium characterized by its rod shape and a single replicon. This strain has been isolated from marine sponges, specifically from the host Mycale grandis. The association with marine sponges suggests that P. rubra may play a role in the complex microbial community found within these organisms. The habitat of this strain is significant as it indicates its adaptation to marine environments, which are often rich in biodiversity and complex ecological interactions. The relationship with Mycale grandis could imply a potential symbiotic role, contributing to the health of the sponge or interacting with other microbial inhabitants. The accession number for Pseudoalteromonas rubra strain S4059 is NZ_CP045429.1, which provides a reference for further genomic and taxonomic studies. Understanding the genomic characteristics of this strain could reveal insights into its metabolic capabilities and potential functions within its marine sponge habitat. Overall, the ecological insight that can be drawn from the existence of Pseudoalteromonas rubra strain S4059 is its potential contribution to the sponge microbiome, which is crucial for nutrient cycling and the overall health of marine ecosystems. The interactions between this bacterium and its sponge host may foster a symbiotic relationship, highlighting the importance of microbial diversity in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas rubra
Strainstrain S4059

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; marine sponge
Biotic relationshipNot Available
Host(s)Mycale grandis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas rubra strain S4059 chromosome 1, complete

Gene Summary

Adenine Count

593177 bp

Thymine Count

611633 bp

Guanine Count

590156 bp

Cytosine Count

514860 bp

Genome Length

2309826 bp

Protein-coding Genes

3740 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCWC22_RS13780Not AvailablePositive3156023 - 315649017828.8
hypothetical proteinCWC22_RS13785Not AvailablePositive3156593 - 31568328998.23
dna endonuclease smraCWC22_RS13790Not AvailablePositive3156959 - 315754022164.7
hypothetical proteinCWC22_RS13795Not AvailableNegative3157566 - 31577215463.41
2-hydroxyacid dehydrogenaseCWC22_RS13800Not AvailableNegative3157938 - 315885833482.6
gnat family n-acyltransferaseCWC22_RS13805Not AvailablePositive3159023 - 316074465001.9
tlpa family protein disulfide reductaseCWC22_RS13810Not AvailablePositive3160806 - 316129117885.7
tonb-dependent receptor plug domain-containing proteinCWC22_RS13815Not AvailablePositive3161431 - 316350078209.4
peptidylprolyl isomeraseCWC22_RS13820Not AvailablePositive3163598 - 316387610312.8
grxa family glutaredoxinCWC22_RS13825Not AvailablePositive3163979 - 31642429913.8

Displaying genes 2761 – 2770 of 3921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.