Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | CWC22_RS13680 | Not Available | Negative | 3136208 - 3137185 | 36474.4 |
| outer membrane protein assembly factor bamd | CWC22_RS13685 | Not Available | Positive | 3137307 - 3138068 | 28994.6 |
| nitrogen regulatory protein p-ii | CWC22_RS13690 | Not Available | Negative | 3138151 - 3138489 | 12553.3 |
| gsph/fimt family pseudopilin | CWC22_RS13695 | Not Available | Positive | 3138625 - 3139164 | 19480.0 |
| gsph/fimt family pseudopilin | CWC22_RS13700 | Not Available | Positive | 3139340 - 3139855 | 19105.6 |
| type iv pilin protein | CWC22_RS13705 | Not Available | Negative | 3139920 - 3140342 | 15249.2 |
| pilus assembly protein | CWC22_RS13710 | Not Available | Negative | 3140329 - 3143505 | 115966.0 |
| pilus assembly protein pilx | CWC22_RS13715 | Not Available | Negative | 3143505 - 3143999 | 18053.8 |
| pilw family protein | CWC22_RS13720 | Not Available | Negative | 3143993 - 3144970 | 36073.7 |
| type iv pilus modification protein pilv | CWC22_RS13725 | Not Available | Negative | 3144972 - 3145538 | 20241.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
