Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme abc transporter atp-binding protein | CWC22_RS13630 | Not Available | Positive | 3123683 - 3124480 | 29308.2 |
| hugz family protein | CWC22_RS13635 | Not Available | Positive | 3124473 - 3125213 | 27972.0 |
| signal recognition particle protein | CWC22_RS13640 | Not Available | Negative | 3125437 - 3126816 | 50197.8 |
| inner membrane protein ypjd | CWC22_RS13645 | Not Available | Positive | 3126979 - 3127785 | 29544.3 |
| hlyc/corc family transporter | CWC22_RS13650 | Not Available | Positive | 3127879 - 3129162 | 47531.0 |
| hypothetical protein | CWC22_RS13655 | Not Available | Negative | 3129225 - 3129833 | 23641.1 |
| glutamate--cysteine ligase | CWC22_RS13660 | Not Available | Negative | 3129950 - 3131527 | 58871.7 |
| nadp-dependent oxidoreductase | CWC22_RS13665 | Not Available | Negative | 3131599 - 3132534 | 33461.1 |
| atp-dependent chaperone clpb | CWC22_RS13670 | Not Available | Negative | 3132654 - 3135227 | 95740.7 |
| peptidoglycan editing factor pgef | CWC22_RS13675 | Not Available | Negative | 3135481 - 3136206 | 26257.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
