Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase assembly factor 2 | CWC22_RS13385 | Not Available | Negative | 3077793 - 3078044 | 9843.87 |
| ygfz/gcvt domain-containing protein | CWC22_RS13390 | Not Available | Positive | 3078206 - 3079123 | 33547.0 |
| peptidylprolyl isomerase | CWC22_RS13395 | Not Available | Positive | 3079135 - 3079614 | 17300.2 |
| hypothetical protein | CWC22_RS13400 | Not Available | Negative | 3079645 - 3080085 | 16482.1 |
| ydiy family protein | CWC22_RS13405 | Not Available | Negative | 3080099 - 3080926 | 31723.0 |
| duf440 family protein | CWC22_RS13410 | Not Available | Negative | 3080941 - 3081258 | 11826.5 |
| crotonase/enoyl-coa hydratase family protein | CWC22_RS13415 | Not Available | Positive | 3081482 - 3082276 | 29811.6 |
| cida/lrga family protein | CWC22_RS13420 | Not Available | Positive | 3082347 - 3082703 | 12799.6 |
| lrgb family protein | CWC22_RS13425 | Not Available | Positive | 3082696 - 3083388 | 24368.0 |
| mechanosensitive ion channel family protein | CWC22_RS13430 | Not Available | Positive | 3083461 - 3084300 | 30132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
