Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | CWC22_RS13335 | Not Available | Negative | 3068529 - 3069431 | 34213.4 |
| ribonuclease iii | CWC22_RS13340 | Not Available | Negative | 3069421 - 3070098 | 25171.2 |
| signal peptidase i | CWC22_RS13345 | Not Available | Negative | 3070100 - 3071035 | 35532.7 |
| translation elongation factor 4 | CWC22_RS13350 | Not Available | Negative | 3071047 - 3072834 | 66272.0 |
| soxr reducing system rsec family protein | CWC22_RS13355 | Not Available | Negative | 3072893 - 3073351 | 16643.7 |
| mucb/rseb c-terminal domain-containing protein | CWC22_RS13360 | Not Available | Negative | 3073348 - 3074301 | 35114.0 |
| sigma-e factor negative regulatory protein | CWC22_RS13365 | Not Available | Negative | 3074302 - 3074901 | 21584.0 |
| rna polymerase sigma factor rpoe | CWC22_RS13370 | Not Available | Negative | 3074898 - 3075482 | 21743.7 |
| l-aspartate oxidase | CWC22_RS13375 | Not Available | Positive | 3075741 - 3077366 | 60418.6 |
| protein ygfx | CWC22_RS13380 | Not Available | Negative | 3077402 - 3077752 | 13717.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
