Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | CWC22_RS13285 | Not Available | Negative | 3060367 - 3060675 | 11610.9 |
| outer membrane protein assembly factor bame | CWC22_RS13290 | Not Available | Positive | 3060806 - 3061165 | 13670.3 |
| ankyrin repeat domain-containing protein | CWC22_RS13295 | Not Available | Negative | 3061218 - 3062579 | 50439.2 |
| duf2897 family protein | CWC22_RS13300 | Not Available | Positive | 3062941 - 3063117 | 6801.54 |
| yjih family protein | CWC22_RS13305 | Not Available | Negative | 3063150 - 3064520 | 49019.7 |
| outer membrane protein assembly factor bamc | CWC22_RS13310 | Not Available | Negative | 3064619 - 3065686 | 40404.5 |
| glycine cleavage system protein r | CWC22_RS13315 | Not Available | Positive | 3066021 - 3066554 | 19913.9 |
| thioredoxin-dependent thiol peroxidase | CWC22_RS13320 | Not Available | Positive | 3066565 - 3067035 | 17451.8 |
| pyridoxine 5'-phosphate synthase | CWC22_RS13325 | Not Available | Negative | 3067084 - 3067815 | 26631.0 |
| dna repair protein reco | CWC22_RS13330 | Not Available | Negative | 3067821 - 3068528 | 27460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
