Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | CWC22_RS13135 | Not Available | Negative | 3020622 - 3021419 | 28589.5 |
| nucleotide exchange factor grpe | CWC22_RS13140 | Not Available | Negative | 3021537 - 3022148 | 22309.9 |
| hrca family transcriptional regulator | CWC22_RS13145 | Not Available | Negative | 3022207 - 3023151 | 35493.7 |
| nad(+) kinase | CWC22_RS13150 | Not Available | Positive | 3023244 - 3024128 | 32189.8 |
| hypothetical protein | CWC22_RS13155 | Not Available | Positive | 3024191 - 3024766 | 21504.6 |
| dna repair protein recn | CWC22_RS13160 | Not Available | Positive | 3024856 - 3026532 | 61979.6 |
| fad-dependent oxidoreductase | CWC22_RS13165 | Not Available | Negative | 3026645 - 3028060 | 52232.1 |
| glutamate synthase large subunit | CWC22_RS13170 | Not Available | Negative | 3028069 - 3032529 | 162375.0 |
| grx4 family monothiol glutaredoxin | CWC22_RS13175 | Not Available | Negative | 3033054 - 3033401 | 12889.5 |
| fe-mn family superoxide dismutase | CWC22_RS13180 | Not Available | Positive | 3033675 - 3034256 | 21495.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
