Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope integrity protein tola | CWC22_RS13085 | Not Available | Negative | 3011315 - 3012256 | 35667.9 |
| protein tolr | CWC22_RS13090 | Not Available | Negative | 3012256 - 3012684 | 15637.2 |
| protein tolq | CWC22_RS13095 | Not Available | Negative | 3012671 - 3013375 | 25440.1 |
| holliday junction branch migration dna helicase ruvb | CWC22_RS13100 | Not Available | Negative | 3014361 - 3015368 | 36997.4 |
| holliday junction branch migration protein ruva | CWC22_RS13105 | Not Available | Negative | 3015389 - 3016006 | 22297.3 |
| crossover junction endodeoxyribonuclease ruvc | CWC22_RS13110 | Not Available | Negative | 3016009 - 3016530 | 18646.8 |
| aspartate--trna ligase | CWC22_RS13115 | Not Available | Negative | 3016656 - 3018431 | 66306.4 |
| duf72 domain-containing protein | CWC22_RS13120 | Not Available | Positive | 3018610 - 3019458 | 32363.0 |
| gfa family protein | CWC22_RS13125 | Not Available | Negative | 3019617 - 3020024 | 15011.8 |
| m48 family metallopeptidase | CWC22_RS13130 | Not Available | Positive | 3020096 - 3020620 | 20677.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
