Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | CWC22_RS12985 | Not Available | Negative | 2992979 - 2993569 | 22201.0 |
| fha domain-containing protein | CWC22_RS12990 | Not Available | Positive | 2993914 - 2994870 | 36412.2 |
| duf962 domain-containing protein | CWC22_RS12995 | Not Available | Negative | 2994883 - 2995404 | 19430.2 |
| exodeoxyribonuclease v subunit alpha | CWC22_RS13000 | Not Available | Negative | 2995638 - 2997554 | 70286.6 |
| exodeoxyribonuclease v subunit beta | CWC22_RS13005 | Not Available | Negative | 2997554 - 3001090 | 132614.0 |
| exodeoxyribonuclease v subunit gamma | CWC22_RS13010 | Not Available | Negative | 3001077 - 3004376 | 124926.0 |
| ggdef domain-containing protein | CWC22_RS13015 | Not Available | Negative | 3004532 - 3005560 | 39485.1 |
| Trna-ser | Not Available | Not Available | Positive | 3005718 - 3005808 | Not Available |
| quinolinate synthase nada | CWC22_RS13025 | Not Available | Negative | 3005918 - 3006961 | 38044.9 |
| Trna-lys | Not Available | Not Available | Positive | 3007093 - 3007168 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
