Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid-associated protein yejk | CWC22_RS12935 | Not Available | Negative | 2983829 - 2984845 | 38742.2 |
| duf1414 domain-containing protein | CWC22_RS12940 | Not Available | Positive | 2984912 - 2985124 | 7864.46 |
| duf3413 domain-containing protein | CWC22_RS12945 | Not Available | Positive | 2985129 - 2986625 | 55221.6 |
| duf4124 domain-containing protein | CWC22_RS12950 | Not Available | Positive | 2986709 - 2987182 | 18279.6 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | CWC22_RS12955 | Not Available | Positive | 2987297 - 2989021 | 66436.1 |
| lysr family transcriptional regulator | CWC22_RS12960 | Not Available | Positive | 2989034 - 2989972 | 35357.8 |
| hypothetical protein | CWC22_RS12965 | Not Available | Negative | 2990006 - 2990398 | 15008.1 |
| hypothetical protein | CWC22_RS12970 | Not Available | Positive | 2990626 - 2991486 | 32736.3 |
| hypothetical protein | CWC22_RS12975 | Not Available | Positive | 2991593 - 2992003 | 15184.9 |
| m14 family metallocarboxypeptidase | CWC22_RS12980 | Not Available | Positive | 2992066 - 2992977 | 33783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
