Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna accumulation protein yced | CWC22_RS12885 | Not Available | Negative | 2970927 - 2971451 | 19360.0 |
| maf family protein | CWC22_RS12890 | Not Available | Positive | 2971572 - 2972159 | 21441.8 |
| had-ia family hydrolase | CWC22_RS12895 | Not Available | Negative | 2972121 - 2972789 | 23812.6 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | CWC22_RS12900 | Not Available | Negative | 2972779 - 2973741 | 36393.3 |
| ribonuclease e | CWC22_RS12905 | Not Available | Positive | 2974252 - 2977683 | 126131.0 |
| transglycosylase slt domain-containing protein | CWC22_RS12910 | Not Available | Negative | 2978308 - 2979621 | 49210.1 |
| lpp20 family lipoprotein | CWC22_RS12915 | Not Available | Negative | 2979670 - 2980248 | 20984.2 |
| hypothetical protein | CWC22_RS12920 | Not Available | Positive | 2980451 - 2982160 | 63392.6 |
| penicillin-binding protein activator lpob | CWC22_RS12925 | Not Available | Positive | 2982166 - 2982780 | 23061.3 |
| lpp20 family lipoprotein | CWC22_RS12930 | Not Available | Positive | 2982770 - 2983765 | 35742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
