Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | CWC22_RS12735 | Not Available | Positive | 2939188 - 2940126 | 35173.8 |
| duf4381 domain-containing protein | CWC22_RS12740 | Not Available | Positive | 2940133 - 2940561 | 16041.4 |
| vwa domain-containing protein | CWC22_RS12745 | Not Available | Positive | 2940554 - 2941543 | 36154.2 |
| vwa domain-containing protein | CWC22_RS12750 | Not Available | Positive | 2941540 - 2943474 | 71389.7 |
| batd family protein | CWC22_RS12755 | Not Available | Positive | 2943468 - 2945099 | 60343.5 |
| sigma-70 family rna polymerase sigma factor | CWC22_RS12760 | Not Available | Positive | 2945151 - 2945666 | 19914.6 |
| duf3379 family protein | CWC22_RS12765 | Not Available | Positive | 2945666 - 2946397 | 27131.0 |
| tim44 domain-containing protein | CWC22_RS12770 | Not Available | Positive | 2946689 - 2947585 | 32838.2 |
| lytr/algr family response regulator transcription factor | CWC22_RS12775 | Not Available | Negative | 2947630 - 2949159 | 56836.0 |
| alpha/beta hydrolase | CWC22_RS12780 | Not Available | Positive | 2949306 - 2950805 | 55730.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
