Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vc0807 family protein | CWC22_RS12635 | Not Available | Positive | 2915949 - 2916605 | 23792.9 |
| hypothetical protein | CWC22_RS12640 | Not Available | Negative | 2916680 - 2917189 | 19069.8 |
| hypothetical protein | CWC22_RS12645 | Not Available | Negative | 2917204 - 2917707 | 19423.6 |
| lyse family translocator | CWC22_RS12650 | Not Available | Negative | 2917759 - 2918382 | 22152.6 |
| hypothetical protein | CWC22_RS12655 | Not Available | Negative | 2919013 - 2919345 | 12038.5 |
| is5 family transposase | CWC22_RS12660 | Not Available | Positive | 2919740 - 2920654 | 34032.8 |
| hypothetical protein | CWC22_RS12665 | Not Available | Negative | 2920802 - 2921296 | 18834.4 |
| hypothetical protein | CWC22_RS12670 | Not Available | Negative | 2921771 - 2922541 | 28909.6 |
| ggdef domain-containing phosphodiesterase | CWC22_RS12675 | Not Available | Positive | 2923135 - 2925354 | 83341.9 |
| lysr family transcriptional regulator | CWC22_RS12680 | Not Available | Negative | 2925351 - 2926253 | 33478.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
