Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein yjdm | CWC22_RS12535 | Not Available | Negative | 2888228 - 2888563 | 12257.8 |
| lysr family transcriptional regulator | CWC22_RS12540 | Not Available | Negative | 2888680 - 2889549 | 31779.5 |
| lactoylglutathione lyase family protein | CWC22_RS12545 | Not Available | Positive | 2889643 - 2890149 | 19386.9 |
| hypothetical protein | CWC22_RS12550 | Not Available | Negative | 2890181 - 2890375 | 6140.55 |
| response regulator transcription factor | CWC22_RS12555 | Not Available | Positive | 2890512 - 2891195 | 25477.0 |
| sensor histidine kinase | CWC22_RS12560 | Not Available | Positive | 2891188 - 2892570 | 51770.9 |
| duf1800 family protein | CWC22_RS12565 | Not Available | Positive | 2892739 - 2894604 | 67398.8 |
| duf1501 domain-containing protein | CWC22_RS12570 | Not Available | Positive | 2894616 - 2895968 | 47994.2 |
| mipa/ompv family protein | CWC22_RS12575 | Not Available | Positive | 2896089 - 2896859 | 28636.5 |
| glycerophosphodiester phosphodiesterase family protein | CWC22_RS12580 | Not Available | Negative | 2896909 - 2898339 | 51775.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
