Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase | CWC22_RS00990 | Not Available | Positive | 242221 - 243444 | 43818.1 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | CWC22_RS00995 | Not Available | Positive | 243450 - 245798 | 86094.0 |
| penicillin-binding protein 1a | CWC22_RS01000 | Not Available | Negative | 245844 - 248291 | 90905.0 |
| pilus assembly protein pilm | CWC22_RS01005 | Not Available | Positive | 248516 - 249595 | 38884.9 |
| piln domain-containing protein | CWC22_RS01010 | Not Available | Positive | 249583 - 250179 | 22839.8 |
| type 4a pilus biogenesis protein pilo | CWC22_RS01015 | Not Available | Positive | 250183 - 250788 | 23025.8 |
| pilus assembly protein pilp | CWC22_RS01020 | Not Available | Positive | 250785 - 251324 | 20254.4 |
| type iv pilus secretin pilq | CWC22_RS01025 | Not Available | Positive | 251338 - 253383 | 75615.4 |
| shikimate kinase arok | CWC22_RS01030 | Not Available | Positive | 253535 - 254053 | 19548.2 |
| 3-dehydroquinate synthase | CWC22_RS01035 | Not Available | Positive | 254084 - 255154 | 39118.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
