Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4386 domain-containing protein | CWC22_RS12390 | Not Available | Negative | 2858423 - 2859109 | 24965.5 |
| helix-turn-helix domain-containing protein | CWC22_RS12395 | Not Available | Negative | 2859250 - 2860386 | 42918.0 |
| serine hydrolase domain-containing protein | CWC22_RS12400 | Not Available | Positive | 2860757 - 2862553 | 66524.8 |
| metal-dependent hydrolase family protein | CWC22_RS12405 | Not Available | Negative | 2862621 - 2863898 | 45359.6 |
| mfs transporter | CWC22_RS12410 | Not Available | Negative | 2864017 - 2865792 | 65113.9 |
| hypothetical protein | CWC22_RS12415 | Not Available | Positive | 2865859 - 2868261 | 90197.5 |
| hypothetical protein | CWC22_RS12420 | Not Available | Negative | 2868354 - 2868665 | 11412.8 |
| duf5992 family protein | CWC22_RS12425 | Not Available | Negative | 2869184 - 2869510 | 11433.4 |
| type ii secretion system protein gspg | CWC22_RS12430 | Not Available | Negative | 2869864 - 2870373 | 18923.7 |
| aaa family atpase | CWC22_RS12435 | Not Available | Negative | 2870435 - 2870929 | 18628.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
