Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ychj family protein | CWC22_RS12290 | Not Available | Positive | 2840646 - 2841101 | 17210.3 |
| vc2046/so_2500 family protein | CWC22_RS12295 | Not Available | Negative | 2841543 - 2842064 | 19117.8 |
| Trna-tyr | Not Available | Not Available | Positive | 2842177 - 2842261 | Not Available |
| enoyl-coa hydratase/isomerase family protein | CWC22_RS12305 | Not Available | Negative | 2842715 - 2843560 | 31294.4 |
| is5 family transposase | CWC22_RS12310 | Not Available | Negative | 2843815 - 2844516 | 26047.2 |
| substrate-binding periplasmic protein | CWC22_RS12315 | Not Available | Positive | 2844857 - 2845579 | 27770.7 |
| m48 family metallopeptidase | CWC22_RS12320 | Not Available | Negative | 2846058 - 2846738 | 26043.5 |
| ion channel | CWC22_RS12325 | Not Available | Positive | 2846811 - 2847791 | 37037.5 |
| hd domain-containing protein | CWC22_RS12330 | Not Available | Negative | 2847788 - 2848435 | 23873.6 |
| class i sam-dependent methyltransferase | CWC22_RS12335 | Not Available | Positive | 2848519 - 2849709 | 44357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
