Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | CWC22_RS11495 | Not Available | Negative | 2646583 - 2647377 | 28666.4 |
| tigr01621 family pseudouridine synthase | CWC22_RS11500 | Not Available | Negative | 2647379 - 2648044 | 24347.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | CWC22_RS11505 | Not Available | Negative | 2648031 - 2648795 | 28319.9 |
| trm112 family protein | CWC22_RS11510 | Not Available | Negative | 2648783 - 2648980 | 7420.96 |
| tetraacyldisaccharide 4'-kinase | CWC22_RS11515 | Not Available | Negative | 2648970 - 2649953 | 36319.9 |
| lipid a export permease/atp-binding protein msba | CWC22_RS11520 | Not Available | Negative | 2649950 - 2651692 | 64455.8 |
| dna internalization-related competence protein comec/rec2 | CWC22_RS11525 | Not Available | Negative | 2651756 - 2654011 | 83908.9 |
| duf2062 domain-containing protein | CWC22_RS11530 | Not Available | Positive | 2653991 - 2654509 | 19484.9 |
| marc family protein | CWC22_RS11535 | Not Available | Negative | 2654633 - 2655241 | 21415.1 |
| leucine-rich repeat domain-containing protein | CWC22_RS11540 | Not Available | Negative | 2655500 - 2658841 | 121036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
