Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen iii oxidase | CWC22_RS00890 | Not Available | Negative | 218037 - 219407 | 51585.7 |
| methyl-accepting chemotaxis protein | CWC22_RS00895 | Not Available | Negative | 219525 - 221474 | 71513.6 |
| methyl-accepting chemotaxis protein | CWC22_RS00900 | Not Available | Negative | 221607 - 223637 | 73825.9 |
| nadp-binding protein | CWC22_RS00905 | Not Available | Positive | 223899 - 224660 | 27488.6 |
| histidine utilization repressor | CWC22_RS00910 | Not Available | Negative | 224667 - 225377 | 26631.0 |
| imidazolonepropionase | CWC22_RS00915 | Not Available | Positive | 225529 - 226749 | 44139.0 |
| ggdef domain-containing phosphodiesterase | CWC22_RS00920 | Not Available | Positive | 226774 - 228639 | 69125.3 |
| formimidoylglutamase | CWC22_RS00925 | Not Available | Negative | 228648 - 229700 | 38673.4 |
| ribonuclease e activity regulator rraa | CWC22_RS00930 | Not Available | Negative | 229776 - 230282 | 18244.2 |
| phosphatase pap2 family protein | CWC22_RS00935 | Not Available | Positive | 230444 - 230965 | 18602.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
