Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 2432477 - 2432562 | Not Available |
| Trna-undet | Not Available | Not Available | Positive | 2432604 - 2432689 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2432731 - 2432816 | Not Available |
| extracellular solute-binding protein | CWC22_RS10560 | Not Available | Positive | 2433261 - 2434457 | 45039.2 |
| atp-binding protein | CWC22_RS10565 | Not Available | Positive | 2434429 - 2436651 | 82579.0 |
| type 1 glutamine amidotransferase domain-containing protein | CWC22_RS10570 | Not Available | Negative | 2436823 - 2437569 | 27208.8 |
| winged helix-turn-helix domain-containing protein | CWC22_RS10575 | Not Available | Positive | 2437860 - 2439938 | 78542.9 |
| efflux rnd transporter periplasmic adaptor subunit | CWC22_RS10580 | Not Available | Positive | 2440136 - 2441407 | 47427.9 |
| abc transporter atp-binding protein | CWC22_RS10585 | Not Available | Positive | 2441420 - 2442136 | 26250.8 |
| abc transporter permease | CWC22_RS10590 | Not Available | Positive | 2442129 - 2444543 | 90157.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
