Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | CWC22_RS10440 | Not Available | Positive | 2414119 - 2415990 | 68633.7 |
| asparaginase | CWC22_RS10445 | Not Available | Positive | 2416080 - 2417090 | 36776.3 |
| nadp-dependent phosphogluconate dehydrogenase | CWC22_RS10450 | Not Available | Negative | 2417161 - 2418534 | 49339.1 |
| pyruvate kinase | CWC22_RS10455 | Not Available | Positive | 2418854 - 2420287 | 50941.9 |
| lytr/algr family response regulator transcription factor | CWC22_RS10460 | Not Available | Negative | 2420357 - 2421181 | 30671.1 |
| sensor histidine kinase | CWC22_RS10465 | Not Available | Negative | 2421186 - 2422256 | 41341.4 |
| amidohydrolase family protein | CWC22_RS10470 | Not Available | Negative | 2422421 - 2423665 | 44111.5 |
| amidohydrolase | CWC22_RS10475 | Not Available | Negative | 2423676 - 2425058 | 50490.6 |
| duf3718 domain-containing protein | CWC22_RS10480 | Not Available | Positive | 2425679 - 2426038 | 12700.6 |
| duf445 domain-containing protein | CWC22_RS10485 | Not Available | Negative | 2426142 - 2426834 | 25313.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
