Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | CWC22_RS10335 | Not Available | Negative | 2389152 - 2389589 | 15763.1 |
| hypothetical protein | CWC22_RS10340 | Not Available | Negative | 2390099 - 2390512 | 15441.5 |
| orotidine-5'-phosphate decarboxylase | CWC22_RS10345 | Not Available | Negative | 2390897 - 2391607 | 25128.4 |
| lipopolysaccharide assembly protein lapb | CWC22_RS10350 | Not Available | Negative | 2391643 - 2392806 | 44405.3 |
| integration host factor subunit beta | CWC22_RS10360 | Not Available | Negative | 2393082 - 2393372 | 10831.9 |
| 30s ribosomal protein s1 | CWC22_RS10365 | Not Available | Negative | 2393432 - 2395099 | 61012.5 |
| (d)cmp kinase | CWC22_RS10370 | Not Available | Negative | 2395195 - 2395902 | 25648.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | CWC22_RS10375 | Not Available | Negative | 2396117 - 2397394 | 45682.7 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | CWC22_RS10380 | Not Available | Negative | 2397394 - 2398476 | 40237.2 |
| dna topoisomerase (atp-hydrolyzing) subunit a | CWC22_RS10385 | Not Available | Negative | 2398620 - 2401283 | 98844.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
