Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6768 family protein | CWC22_RS09490 | Not Available | Negative | 2213383 - 2213739 | 13571.8 |
| rna polymerase sigma factor | CWC22_RS09495 | Not Available | Negative | 2213736 - 2214254 | 19846.6 |
| lysr family transcriptional regulator | CWC22_RS09500 | Not Available | Negative | 2214318 - 2215211 | 32562.2 |
| zinc-dependent alcohol dehydrogenase family protein | CWC22_RS09505 | Not Available | Positive | 2215310 - 2216296 | 34044.1 |
| n-succinylarginine dihydrolase | CWC22_RS09510 | Not Available | Positive | 2216650 - 2217987 | 49210.8 |
| helix-turn-helix domain-containing protein | CWC22_RS09515 | Not Available | Negative | 2217999 - 2218769 | 29429.5 |
| m23 family metallopeptidase | CWC22_RS09520 | Not Available | Positive | 2218944 - 2219966 | 37947.2 |
| gnat family n-acetyltransferase | CWC22_RS09525 | Not Available | Positive | 2220081 - 2220515 | 16468.9 |
| hypothetical protein | CWC22_RS09530 | Not Available | Negative | 2220573 - 2220842 | 9675.73 |
| hypothetical protein | CWC22_RS09535 | Not Available | Negative | 2220851 - 2222188 | 48492.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
