Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 15 protein | CWC22_RS09390 | Not Available | Positive | 2193061 - 2195454 | 87483.0 |
| duf805 domain-containing protein | CWC22_RS09395 | Not Available | Positive | 2195657 - 2196043 | 14377.8 |
| isochorismatase | CWC22_RS09400 | Not Available | Negative | 2196062 - 2196436 | 14140.5 |
| lysr family transcriptional regulator | CWC22_RS09405 | Not Available | Positive | 2196563 - 2197423 | 31420.0 |
| substrate-binding periplasmic protein | CWC22_RS09410 | Not Available | Negative | 2197429 - 2198139 | 26483.9 |
| serine hydrolase domain-containing protein | CWC22_RS09415 | Not Available | Positive | 2198568 - 2199761 | 43942.6 |
| nad-dependent epimerase/dehydratase family protein | CWC22_RS09420 | Not Available | Positive | 2199884 - 2200783 | 32953.3 |
| hypothetical protein | CWC22_RS09425 | Not Available | Positive | 2200863 - 2201738 | 32270.2 |
| duf2071 domain-containing protein | CWC22_RS09430 | Not Available | Positive | 2201968 - 2202771 | 30355.7 |
| dsba family protein | CWC22_RS09435 | Not Available | Positive | 2202817 - 2203446 | 23613.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
