Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2846 domain-containing protein | CWC22_RS09290 | Not Available | Positive | 2163571 - 2164047 | 17661.3 |
| hypothetical protein | CWC22_RS09295 | Not Available | Positive | 2164239 - 2164535 | 10794.2 |
| collagenase | CWC22_RS09300 | Not Available | Positive | 2165382 - 2168159 | 100608.0 |
| amino acid abc transporter substrate-binding protein | CWC22_RS09305 | Not Available | Positive | 2168250 - 2169017 | 29691.7 |
| voc family protein | CWC22_RS09310 | Not Available | Negative | 2169095 - 2169535 | 16493.7 |
| pre-peptidase c-terminal domain-containing protein | CWC22_RS09315 | Not Available | Negative | 2169631 - 2171589 | 71171.3 |
| duf1566 domain-containing protein | CWC22_RS09320 | Not Available | Negative | 2171611 - 2172291 | 25754.4 |
| ethylbenzene dehydrogenase-related protein | CWC22_RS09325 | Not Available | Negative | 2172288 - 2173703 | 54047.9 |
| ggdef domain-containing protein | CWC22_RS09330 | Not Available | Positive | 2173967 - 2175175 | 45212.5 |
| duf2066 domain-containing protein | CWC22_RS09335 | Not Available | Positive | 2175287 - 2176342 | 40201.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
