Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic polysaccharide monooxygenase | CWC22_RS09140 | Not Available | Positive | 2124700 - 2126289 | 59014.6 |
| glycosyl hydrolase family 18 protein | CWC22_RS09145 | Not Available | Positive | 2126309 - 2128951 | 95869.1 |
| ig-like domain-containing protein | CWC22_RS09150 | Not Available | Positive | 2129040 - 2131796 | 101455.0 |
| hypothetical protein | CWC22_RS09155 | Not Available | Positive | 2131947 - 2132660 | 26507.2 |
| phosphate abc transporter substrate-binding protein | CWC22_RS09160 | Not Available | Negative | 2132902 - 2133309 | 14465.0 |
| porin | CWC22_RS09165 | Not Available | Negative | 2133320 - 2134393 | 40295.7 |
| methyl-accepting chemotaxis protein | CWC22_RS09170 | Not Available | Negative | 2134577 - 2136196 | 58736.1 |
| hypothetical protein | CWC22_RS09175 | Not Available | Positive | 2136773 - 2137972 | 43859.7 |
| phosphate abc transporter substrate-binding protein | CWC22_RS09180 | Not Available | Positive | 2137983 - 2138387 | 14217.0 |
| substrate-binding periplasmic protein | CWC22_RS09185 | Not Available | Negative | 2138384 - 2139115 | 27554.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
