Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CWC22_RS00640 | Not Available | Negative | 159783 - 161069 | 46307.9 |
| transcription termination factor rho | CWC22_RS00645 | Not Available | Negative | 161287 - 162546 | 46997.0 |
| thioredoxin trxa | CWC22_RS00650 | Not Available | Negative | 162765 - 163091 | 11839.3 |
| atp-dependent rna helicase rhlb | CWC22_RS00655 | Not Available | Positive | 163183 - 164469 | 48266.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | CWC22_RS00660 | Not Available | Positive | 164508 - 166010 | 55588.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 166533 - 168065 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 168142 - 168218 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 168334 - 168409 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 168696 - 171575 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 171694 - 171808 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
