Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | CWC22_RS08890 | Not Available | Positive | 2058547 - 2059890 | 48237.9 |
| sigma-54 interaction domain-containing protein | CWC22_RS08895 | Not Available | Positive | 2059955 - 2061391 | 53746.4 |
| cytochrome c oxidase accessory protein ccog | CWC22_RS08900 | Not Available | Positive | 2061530 - 2062915 | 52697.3 |
| transporter substrate-binding domain-containing protein | CWC22_RS08905 | Not Available | Negative | 2062923 - 2063807 | 33774.1 |
| hypothetical protein | CWC22_RS08910 | Not Available | Positive | 2064109 - 2064723 | 23274.6 |
| acetoacetate decarboxylase | CWC22_RS08915 | Not Available | Positive | 2064887 - 2065849 | 36943.1 |
| nad(p)-binding protein | CWC22_RS08920 | Not Available | Positive | 2065859 - 2068096 | 84482.5 |
| tonb-dependent receptor | CWC22_RS08925 | Not Available | Positive | 2068239 - 2070470 | 83259.5 |
| atp-binding protein | CWC22_RS08930 | Not Available | Positive | 2070510 - 2073191 | 100311.0 |
| hypothetical protein | CWC22_RS08935 | Not Available | Positive | 2073510 - 2075219 | 60477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
