Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2046274 - 2047806 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2047883 - 2047959 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2048075 - 2048150 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2048435 - 2051314 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2051432 - 2051546 | Not Available |
| glycosyl hydrolase family 18 protein | CWC22_RS08865 | Not Available | Positive | 2052645 - 2054057 | 50881.5 |
| metal-dependent hydrolase | CWC22_RS08870 | Not Available | Negative | 2054113 - 2054826 | 25480.9 |
| mapeg family protein | CWC22_RS08875 | Not Available | Negative | 2054948 - 2055355 | 16153.2 |
| glxa family transcriptional regulator | CWC22_RS08880 | Not Available | Positive | 2055453 - 2056406 | 36189.7 |
| duf1800 family protein | CWC22_RS08885 | Not Available | Positive | 2056480 - 2058534 | 75394.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
