Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease sohb | CWC22_RS08190 | Not Available | Positive | 1893001 - 1894014 | 37433.2 |
| sixa phosphatase family protein | CWC22_RS08195 | Not Available | Negative | 1894045 - 1894545 | 18943.9 |
| abc transporter atp-binding protein | CWC22_RS08200 | Not Available | Negative | 1894583 - 1895500 | 33462.1 |
| abc transporter permease subunit | CWC22_RS08205 | Not Available | Negative | 1895497 - 1896306 | 29855.7 |
| is4 family transposase | CWC22_RS08210 | Not Available | Negative | 1896415 - 1897743 | 50774.2 |
| m2 family metallopeptidase | CWC22_RS08215 | Not Available | Negative | 1897867 - 1899678 | 68526.8 |
| acyl-coa dehydrogenase | CWC22_RS08220 | Not Available | Positive | 1899827 - 1902091 | 82861.6 |
| hypothetical protein | CWC22_RS08225 | Not Available | Negative | 1902213 - 1902650 | 16542.9 |
| pkd domain-containing protein | CWC22_RS08230 | Not Available | Negative | 1902813 - 1905158 | 85620.5 |
| efflux rnd transporter permease subunit | CWC22_RS08235 | Not Available | Negative | 1905357 - 1908500 | 116019.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
