Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf484 family protein | CWC22_RS00540 | Not Available | Negative | 136497 - 137141 | 24351.8 |
| diaminopimelate epimerase | CWC22_RS00545 | Not Available | Negative | 137138 - 137968 | 30483.6 |
| diaminopimelate decarboxylase | CWC22_RS00550 | Not Available | Negative | 138057 - 139310 | 45528.5 |
| lps translocon maturation chaperone lptm | CWC22_RS00555 | Not Available | Negative | 139311 - 139508 | 7110.27 |
| iron donor protein cyay | CWC22_RS00560 | Not Available | Positive | 139636 - 139956 | 12420.3 |
| alpha/beta hydrolase | CWC22_RS00565 | Not Available | Positive | 139956 - 140609 | 23896.0 |
| duf2914 domain-containing protein | CWC22_RS00570 | Not Available | Positive | 140627 - 141505 | 32085.5 |
| hydroxymethylbilane synthase | CWC22_RS00575 | Not Available | Positive | 141525 - 142463 | 33966.8 |
| uroporphyrinogen-iii c-methyltransferase | CWC22_RS00580 | Not Available | Positive | 142465 - 144264 | 66187.9 |
| heme biosynthesis hemy n-terminal domain-containing protein | CWC22_RS00585 | Not Available | Positive | 144261 - 145364 | 40766.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
