Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metalloprotease | CWC22_RS07435 | Not Available | Negative | 1732380 - 1733831 | 54100.1 |
| hypothetical protein | CWC22_RS07440 | Not Available | Negative | 1733833 - 1734498 | 25583.9 |
| hypothetical protein | CWC22_RS07445 | Not Available | Positive | 1734623 - 1734880 | 10365.5 |
| ai-2e family transporter | CWC22_RS07450 | Not Available | Positive | 1734873 - 1735949 | 39893.0 |
| aminotransferase class v-fold plp-dependent enzyme | CWC22_RS07455 | Not Available | Positive | 1736123 - 1738366 | 81131.9 |
| laci family dna-binding transcriptional regulator | CWC22_RS07460 | Not Available | Negative | 1738402 - 1739439 | 38030.1 |
| glucose-6-phosphate isomerase | CWC22_RS07465 | Not Available | Positive | 1739829 - 1741469 | 60775.1 |
| glucose-6-phosphate dehydrogenase | CWC22_RS07470 | Not Available | Positive | 1741938 - 1743410 | 55345.0 |
| 6-phosphogluconolactonase | CWC22_RS07475 | Not Available | Positive | 1743410 - 1744120 | 25187.9 |
| is4 family transposase | CWC22_RS07480 | Not Available | Positive | 1744258 - 1745586 | 50774.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
