Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t | CWC22_RS07385 | Not Available | Negative | 1724136 - 1724798 | 24142.4 |
| flagellar protein moty | CWC22_RS07390 | Not Available | Positive | 1725052 - 1725927 | 33234.6 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | CWC22_RS07395 | Not Available | Negative | 1725977 - 1727962 | 73930.6 |
| beta-ketoacyl-acp synthase i | CWC22_RS07400 | Not Available | Positive | 1728143 - 1729357 | 42677.6 |
| ssra-binding protein smpb | CWC22_RS07405 | Not Available | Negative | 1729420 - 1729899 | 18611.7 |
| srpbcc family protein | CWC22_RS07410 | Not Available | Positive | 1730029 - 1730466 | 16462.8 |
| rnfh family protein | CWC22_RS07415 | Not Available | Positive | 1730463 - 1730786 | 11845.3 |
| duf2069 domain-containing protein | CWC22_RS07420 | Not Available | Negative | 1730833 - 1731285 | 17256.5 |
| nad(p)h:quinone oxidoreductase | CWC22_RS07425 | Not Available | Negative | 1731282 - 1731833 | 19865.9 |
| arsenate reductase (glutaredoxin) | CWC22_RS07430 | Not Available | Negative | 1731838 - 1732185 | 12939.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
