Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CWC22_RS07335 | Not Available | Positive | 1715399 - 1715614 | 7792.4 |
| hypothetical protein | CWC22_RS07340 | Not Available | Positive | 1715607 - 1715897 | 10895.0 |
| p-loop ntpase fold protein | CWC22_RS07345 | Not Available | Negative | 1715964 - 1717520 | 58925.5 |
| site-specific dna-methyltransferase | CWC22_RS07350 | Not Available | Positive | 1717936 - 1718112 | 6248.37 |
| dna-methyltransferase | CWC22_RS07355 | Not Available | Positive | 1718138 - 1718599 | 16922.5 |
| hypothetical protein | CWC22_RS07360 | Not Available | Positive | 1718777 - 1720462 | 65134.5 |
| glycoside hydrolase family protein | CWC22_RS07365 | Not Available | Positive | 1720534 - 1720923 | 14752.0 |
| hypothetical protein | CWC22_RS07370 | Not Available | Positive | 1721176 - 1721364 | 6279.69 |
| Tmrna,resume consensus sequence (at 85): agtaatcgcaaacgacga | Not Available | Not Available | Positive | 1721507 - 1721863 | Not Available |
| duf342 domain-containing protein | CWC22_RS07380 | Not Available | Positive | 1722451 - 1724085 | 59724.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
