Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii polyketide synthase | CWC22_RS07285 | Not Available | Positive | 1704665 - 1705708 | 38218.0 |
| tetratricopeptide repeat-containing diguanylate cyclase | CWC22_RS07290 | Not Available | Positive | 1705925 - 1707856 | 72848.4 |
| hypothetical protein | CWC22_RS07295 | Not Available | Negative | 1708023 - 1708859 | 30707.5 |
| mipa/ompv family protein | CWC22_RS07300 | Not Available | Positive | 1709127 - 1709990 | 32624.2 |
| duf3019 domain-containing protein | CWC22_RS07305 | Not Available | Positive | 1710022 - 1710447 | 15840.3 |
| serine hydrolase domain-containing protein | CWC22_RS07310 | Not Available | Positive | 1710572 - 1711771 | 43791.2 |
| hypothetical protein | CWC22_RS07315 | Not Available | Positive | 1711990 - 1712307 | 12296.3 |
| nacht domain-containing protein | CWC22_RS07320 | Not Available | Negative | 1712554 - 1714467 | 72805.0 |
| recombination protein ninb | CWC22_RS07325 | Not Available | Positive | 1714471 - 1715070 | 23192.8 |
| nuclease domain-containing protein | CWC22_RS07330 | Not Available | Positive | 1715100 - 1715399 | 11320.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
