Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | CWC22_RS07235 | Not Available | Negative | 1693183 - 1694643 | 55269.3 |
| lysr family transcriptional regulator | CWC22_RS07240 | Not Available | Negative | 1694713 - 1695588 | 32771.5 |
| nadh-quinone oxidoreductase subunit l | CWC22_RS07245 | Not Available | Positive | 1695691 - 1697265 | 57559.8 |
| ybcc family protein | CWC22_RS07250 | Not Available | Positive | 1697267 - 1699708 | 91102.0 |
| hypothetical protein | CWC22_RS07255 | Not Available | Positive | 1699871 - 1700122 | 9199.15 |
| hypothetical protein | CWC22_RS07260 | Not Available | Positive | 1700520 - 1700882 | 12614.7 |
| substrate-binding periplasmic protein | CWC22_RS07265 | Not Available | Positive | 1701070 - 1701816 | 27771.9 |
| glxa family transcriptional regulator | CWC22_RS07270 | Not Available | Positive | 1701972 - 1702922 | 35314.3 |
| s41 family peptidase | CWC22_RS07275 | Not Available | Positive | 1702919 - 1704193 | 47180.3 |
| hypothetical protein | CWC22_RS07280 | Not Available | Negative | 1704254 - 1704415 | 5803.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
