Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease signature motif containing protein | CWC22_RS07030 | Not Available | Positive | 1645298 - 1646125 | 31973.7 |
| pas domain-containing sensor histidine kinase | CWC22_RS07040 | Not Available | Positive | 1646753 - 1648258 | 57183.0 |
| response regulator | CWC22_RS07045 | Not Available | Positive | 1648260 - 1648721 | 17400.7 |
| response regulator | CWC22_RS07050 | Not Available | Positive | 1648714 - 1650633 | 72336.2 |
| response regulator | CWC22_RS07055 | Not Available | Positive | 1650630 - 1651061 | 16498.1 |
| ggdef domain-containing response regulator | CWC22_RS07060 | Not Available | Positive | 1651058 - 1652782 | 64996.4 |
| hypothetical protein | CWC22_RS07065 | Not Available | Negative | 1653022 - 1653918 | 33813.3 |
| sphingomyelin phosphodiesterase | CWC22_RS07070 | Not Available | Positive | 1654271 - 1655269 | 37762.8 |
| hypothetical protein | CWC22_RS07075 | Not Available | Positive | 1655908 - 1656861 | 36693.0 |
| hypothetical protein | CWC22_RS07080 | Not Available | Positive | 1656854 - 1657960 | 42374.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
