Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | CWC22_RS06930 | Not Available | Positive | 1621110 - 1621883 | 28724.2 |
| phosphatidate cytidylyltransferase | CWC22_RS06935 | Not Available | Positive | 1621895 - 1622761 | 31621.6 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CWC22_RS06940 | Not Available | Positive | 1622758 - 1623945 | 42808.6 |
| sigma e protease regulator rsep | CWC22_RS06945 | Not Available | Positive | 1623954 - 1625306 | 49213.9 |
| outer membrane protein assembly factor bama | CWC22_RS06950 | Not Available | Positive | 1625374 - 1627845 | 92554.4 |
| omph family outer membrane protein | CWC22_RS06955 | Not Available | Positive | 1627856 - 1628374 | 19613.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | CWC22_RS06960 | Not Available | Positive | 1628374 - 1629414 | 36558.6 |
| 3-hydroxyacyl-acp dehydratase fabz | CWC22_RS06965 | Not Available | Positive | 1629426 - 1629878 | 17048.7 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | CWC22_RS06970 | Not Available | Positive | 1629881 - 1630651 | 27586.0 |
| lipid-a-disaccharide synthase | CWC22_RS06975 | Not Available | Positive | 1630752 - 1631906 | 42421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
