Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | CWC22_RS06540 | Not Available | Negative | 1540527 - 1541657 | 41923.8 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | CWC22_RS06545 | Not Available | Negative | 1541664 - 1542854 | 43682.8 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | CWC22_RS06550 | Not Available | Negative | 1542872 - 1543873 | 37102.8 |
| flagellin | CWC22_RS06555 | Not Available | Positive | 1544099 - 1544884 | 27564.2 |
| sigma-54 dependent transcriptional regulator | CWC22_RS06560 | Not Available | Positive | 1545254 - 1546696 | 53571.4 |
| dna-3-methyladenine glycosylase i | CWC22_RS06565 | Not Available | Negative | 1546848 - 1547459 | 23583.1 |
| sensor histidine kinase | CWC22_RS06570 | Not Available | Positive | 1547642 - 1548754 | 40067.4 |
| sigma-54-dependent transcriptional regulator | CWC22_RS06575 | Not Available | Positive | 1548751 - 1550160 | 51683.5 |
| flagellar hook-basal body complex protein flie | CWC22_RS06580 | Not Available | Positive | 1550346 - 1550687 | 12166.7 |
| flagellar basal-body ms-ring/collar protein flif | CWC22_RS06585 | Not Available | Positive | 1550708 - 1552429 | 63417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
