Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-gamma-glutamate biosynthesis protein pgsc/capc | CWC22_RS06090 | Not Available | Negative | 1438771 - 1441884 | 115672.0 |
| hypothetical protein | CWC22_RS06095 | Not Available | Negative | 1441884 - 1443830 | 73081.2 |
| capa family protein | CWC22_RS06100 | Not Available | Negative | 1443880 - 1446093 | 80809.8 |
| transcriptional regulator tyrr | CWC22_RS06105 | Not Available | Positive | 1446356 - 1447912 | 58165.6 |
| hypothetical protein | CWC22_RS06110 | Not Available | Negative | 1447973 - 1448464 | 18614.2 |
| thioesterase family protein | CWC22_RS06115 | Not Available | Positive | 1448615 - 1449154 | 21162.9 |
| ompw/alkl family protein | CWC22_RS06120 | Not Available | Negative | 1449232 - 1449906 | 24000.4 |
| hypothetical protein | CWC22_RS06125 | Not Available | Negative | 1450312 - 1450620 | 11007.3 |
| response regulator | CWC22_RS06130 | Not Available | Negative | 1450710 - 1451474 | 28680.7 |
| succinyl-diaminopimelate desuccinylase | CWC22_RS06135 | Not Available | Positive | 1451815 - 1452987 | 42477.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
