Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein gcvh | CWC22_RS05380 | Not Available | Positive | 1270047 - 1270436 | 13942.6 |
| aminomethyl-transferring glycine dehydrogenase | CWC22_RS05385 | Not Available | Positive | 1270630 - 1273527 | 104700.0 |
| udp-glucose 6-dehydrogenase | CWC22_RS05390 | Not Available | Negative | 1273607 - 1274566 | 34973.8 |
| hypothetical protein | CWC22_RS05395 | Not Available | Positive | 1274810 - 1275238 | 16082.4 |
| hypothetical protein | CWC22_RS05400 | Not Available | Positive | 1275368 - 1275880 | 19047.1 |
| hypothetical protein | CWC22_RS05405 | Not Available | Positive | 1276015 - 1276242 | 8384.63 |
| hypothetical protein | CWC22_RS05410 | Not Available | Positive | 1278487 - 1278828 | 12367.8 |
| hypothetical protein | CWC22_RS05415 | Not Available | Negative | 1279121 - 1280752 | 60412.2 |
| udp-glucose 6-dehydrogenase | CWC22_RS05420 | Not Available | Positive | 1281186 - 1282162 | 35825.8 |
| vanz family protein | CWC22_RS05425 | Not Available | Positive | 1282363 - 1282827 | 17100.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
