Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CWC22_RS05180 | Not Available | Positive | 1202598 - 1202900 | 11802.6 |
| sensor histidine kinase | CWC22_RS05185 | Not Available | Negative | 1203016 - 1204311 | 48473.5 |
| response regulator transcription factor | CWC22_RS05190 | Not Available | Negative | 1204311 - 1204991 | 25418.1 |
| efflux rnd transporter permease subunit | CWC22_RS05195 | Not Available | Negative | 1204969 - 1208112 | 113828.0 |
| efflux rnd transporter periplasmic adaptor subunit | CWC22_RS05200 | Not Available | Negative | 1208105 - 1209298 | 43636.6 |
| cytochrome-c peroxidase | CWC22_RS05205 | Not Available | Negative | 1209512 - 1211809 | 83736.6 |
| hypothetical protein | CWC22_RS05210 | Not Available | Positive | 1212118 - 1212276 | 5708.09 |
| hypothetical protein | CWC22_RS05215 | Not Available | Negative | 1212900 - 1213121 | 8333.64 |
| hypothetical protein | CWC22_RS05220 | Not Available | Negative | 1213149 - 1213796 | 23567.0 |
| rna polymerase-associated protein rapa | CWC22_RS05225 | Not Available | Negative | 1213979 - 1216873 | 109078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
