Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CWC22_RS05080 | Not Available | Positive | 1181337 - 1181561 | 8559.89 |
| hypothetical protein | CWC22_RS05085 | Not Available | Positive | 1181749 - 1182189 | 16582.1 |
| transposase | CWC22_RS05090 | Not Available | Negative | 1182448 - 1183410 | 37248.4 |
| hypothetical protein | CWC22_RS05095 | Not Available | Positive | 1183672 - 1184280 | 21628.2 |
| hypothetical protein | CWC22_RS05100 | Not Available | Positive | 1184392 - 1184715 | 13179.7 |
| sensor histidine kinase | CWC22_RS05105 | Not Available | Negative | 1184975 - 1186297 | 49517.6 |
| sigma-54-dependent transcriptional regulator | CWC22_RS05110 | Not Available | Negative | 1186303 - 1187685 | 51264.2 |
| adop family duplicated permease | CWC22_RS05115 | Not Available | Negative | 1187774 - 1190209 | 88574.8 |
| abc transporter atp-binding protein | CWC22_RS05120 | Not Available | Negative | 1190220 - 1190948 | 26348.3 |
| efflux rnd transporter periplasmic adaptor subunit | CWC22_RS05125 | Not Available | Negative | 1190958 - 1192208 | 45819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
