Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S4059 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
593177 bp
Thymine Count
611633 bp
Guanine Count
590156 bp
Cytosine Count
514860 bp
Genome Length
2309826 bp
Protein-coding Genes
3740 genes
Non-Coding Genes
181 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cher family methyltransferase | CWC22_RS04980 | Not Available | Positive | 1156248 - 1157081 | 31329.8 |
| hypothetical protein | CWC22_RS04985 | Not Available | Positive | 1157276 - 1157527 | 9152.35 |
| helix-turn-helix domain-containing protein | CWC22_RS04990 | Not Available | Positive | 1157724 - 1158596 | 32978.6 |
| s41 family peptidase | CWC22_RS04995 | Not Available | Positive | 1158675 - 1160069 | 52131.2 |
| abc transporter substrate-binding protein | CWC22_RS05000 | Not Available | Negative | 1160139 - 1161023 | 33760.9 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | CWC22_RS05005 | Not Available | Negative | 1161376 - 1162338 | 37108.6 |
| mipa/ompv family protein | CWC22_RS05010 | Not Available | Positive | 1162477 - 1163313 | 30377.6 |
| response regulator transcription factor | CWC22_RS05015 | Not Available | Positive | 1163336 - 1164010 | 24947.2 |
| sensor histidine kinase | CWC22_RS05020 | Not Available | Positive | 1163997 - 1165286 | 48637.1 |
| hypothetical protein | CWC22_RS05025 | Not Available | Negative | 1165322 - 1165576 | 9488.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
